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Heuristic Modularity for Complex Identification in Protein-Protein Interaction Networks
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     Due to the significant role in understanding cellular processes, the decomposition of Protein-Protein Interaction (PPI) networks into essential building blocks, or complexes, has received much attention for functional bioinformatics research in recent years. One of the well-known bi-clustering descriptors for identifying communities and complexes in complex networks, such as PPI networks, is modularity function.   The contribution of this paper is to introduce heuristic optimization models that can collaborate with the modularity function to improve its detection ability. The definitions of the formulated heuristics are based on nodes and different levels of their neighbor properties.  The modularity function and the formulated heuristics are then injected into the mechanism of a single objective Evolutionary Algorithm (EA) tailored specifically to tackle the problem, and thus, to identify possible complexes from PPI networks. In the experiments, different overlapping scores are used to evaluate the detection accuracy in both complex and protein levels. According to the evaluation metrics, the results reveal that the introduced heuristics have the ability to harness the accuracy of the existing modularity while identifying protein complexes in the tested PPI networks.

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Publication Date
Sun Jun 20 2021
Journal Name
Baghdad Science Journal
Performance Evaluation of Intrusion Detection System using Selected Features and Machine Learning Classifiers
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Some of the main challenges in developing an effective network-based intrusion detection system (IDS) include analyzing large network traffic volumes and realizing the decision boundaries between normal and abnormal behaviors. Deploying feature selection together with efficient classifiers in the detection system can overcome these problems.  Feature selection finds the most relevant features, thus reduces the dimensionality and complexity to analyze the network traffic.  Moreover, using the most relevant features to build the predictive model, reduces the complexity of the developed model, thus reducing the building classifier model time and consequently improves the detection performance.  In this study, two different sets of select

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Publication Date
Thu Aug 30 2018
Journal Name
Journal Of Engineering
Monitoring Land Cover Change Using Remote Sensing and GIS Techniques: a Case Study of Al-Dalmaj Marsh, Iraq
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Al-Dalmaj marsh and the near surrounding area is a very promising area for energy resources, tourism, agricultural and industrial activities. Over the past century, the Al-Dalmaje marsh and near surroundings area endrous from a number of changes. The current study highlights the spatial and temporal changes detection in land cover for Al-Dalmaj marsh and near surroundings area using different analyses methods the supervised maximum likelihood classification method, the Normalized  Difference Vegetation Index (NDVI), Geographic Information Systems(GIS),  and Remote Sensing (RS). Techniques spectral indices were used in this study to determine the change of wetlands and drylands area and of other land classes, th

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Publication Date
Sat Dec 30 2023
Journal Name
Iraqi Journal Of Science
Effective Digital Image Colors Reduction/Quantization Method
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In the current research work, a method to reduce the color levels of the pixels within digital images was proposed. The recent strategy was based on self organization map neural network method (SOM). The efficiency of recent method was compared with the well known logarithmic methods like Floyd-Steinberg (Halftone) dithering and Octtrees (Quadtrees) methods. Experimental results have shown that by adjusting the sampling factor can produce higher-quality images with no much longer run times, or some better quality with shorter running times than existing methods. This observation refutes the repeated neural networks is necessarily slow but have best results. The generated quantization map can be exploited for color image compression, clas

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Publication Date
Thu Jan 30 2020
Journal Name
Journal Of Engineering
Design and Analysis WIMAX Network Based on Coverage Planning
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In this paper, wireless network is planned; the network is predicated on the IEEE 802.16e standardization by WIMAX. The targets of this paper are coverage maximizing, service and low operational fees. WIMAX is planning through three approaches. In approach one; the WIMAX network coverage is major for extension of cell coverage, the best sites (with Band Width (BW) of 5MHz, 20MHZ per sector and four sectors per each cell). In approach two, Interference analysis in CNIR mode. In approach three of the planning, Quality of Services (QoS) is tested and evaluated. ATDI ICS software (Interference Cancellation System) using to perform styling. it shows results in planning area covered 90.49% of the Baghdad City and used 1000 mob

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Publication Date
Tue Oct 29 2019
Journal Name
Journal Of Engineering
Mobile-based Human Emotion Recognition based on Speech and Heart rate
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Mobile-based human emotion recognition is very challenging subject, most of the approaches suggested and built in this field utilized various contexts that can be derived from the external sensors and the smartphone, but these approaches suffer from different obstacles and challenges. The proposed system integrated human speech signal and heart rate, in one system, to leverage the accuracy of the human emotion recognition. The proposed system is designed to recognize four human emotions; angry, happy, sad and normal. In this system, the smartphone is used to   record user speech and send it to a server. The smartwatch, fixed on user wrist, is used to measure user heart rate while the user is speaking and send it, via Bluetooth,

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Publication Date
Wed Jan 13 2021
Journal Name
Iraqi Journal Of Science
Smart Routing Protocol Algorithm Using Fuzzy Artificial Neural Network OSPF
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The OSPF cost is proportionally indicated the transmitting packet overhead through a certain interface and inversely proportional to the interface bandwidth. Thus, this cost may minimized by direct packet transmitting to the other side via various probable paths simultaneously. Logically, the minimum weight path is the optimum path. This paper propose a novel Fuzzy Artificial Neural Network to create Smart Routing Protocol Algorithm. Consequently, the Fuzzy Artificial Neural Network Overlap has been reduced from (0.883 ms) to (0.602 ms) at fuzzy membership 1.5 to 4.5 respectively. This indicated the transmission time is two-fold faster than the standard overlapping time (1.3 ms).

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Publication Date
Fri Jun 24 2022
Journal Name
Iraqi Journal Of Science
Diagnoses System of Varicose Disease
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The diagnoses system of varicose disease has a good level of performance due to the complexity and uniqueness in patterns of vein of the leg. In addition, the patterns of vein are internal of the body, and its features are hard to duplicate, this reason make this method not easy to fake, and thus make it contains of a good features for varicose disease diagnoses. The proposed system used more than one type of algorithms to produce diagnoses system of varicose disease with high accuracy, in addition, this multi-algorithm technique based on veins as a factor to recognize varicose infection. The obtained results indicate that the design of varicose diagnoses system by applying multi- algorithms (Naïve Bayes and Back-Propagation) produced n

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Publication Date
Sun Jan 30 2022
Journal Name
Iraqi Journal Of Science
Gait Recognition Based on Deep Learning
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      In current generation of technology, a robust security system is required based on biometric trait such as human gait, which is a smooth biometric feature to understand humans via their taking walks pattern. In this paper, a person is recognized based on his gait's style that is captured from a video motion previously recorded with a digital camera. The video package is handled via more than one phase after splitting it into a successive image (called frames), which are passes through a preprocessing step earlier than classification procedure operation. The pre-processing steps encompass converting each image into a gray image, cast off all undesirable components and ridding it from noise, discover differen

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Publication Date
Thu Jun 30 2022
Journal Name
Iraqi Journal Of Science
Short Answers Assessment Approach based on Semantic Network
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      Finding similarities in texts is important in many areas such as information retrieval, automated article scoring, and short answer categorization. Evaluating short answers is not an easy task due to differences in natural language. Methods for calculating the similarity between texts depend on semantic or grammatical aspects. This paper discusses a method for evaluating short answers using semantic networks to represent the typical (correct) answer and students' answers. The semantic network of nodes and relationships represents the text (answers). Moreover, grammatical aspects are found  by measuring the similarity of parts of speech between the answers. In addition, finding hierarchical relationships between nodes in netwo

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Publication Date
Mon Mar 11 2019
Journal Name
Baghdad Science Journal
Analysing Iraqi Railways Network by Applying Specific Criteria Using the GIS Techniques
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The railways network is one of the huge infrastructure projects. Therefore, dealing with these projects such as analyzing and developing should be done using appropriate tools, i.e. GIS tools. Because, traditional methods will consume resources, time, money and the results maybe not accurate. In this research, the train stations in all of Iraq’s provinces were studied and analyzed using network analysis, which is one of the most powerful techniques within GIS. A free trial copy of ArcGIS®10.2 software was used in this research in order to achieve the aim of this study. The analysis of current train stations has been done depending on the road network, because people used roads to reach those train stations. The data layers for this st

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