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Heuristic Modularity for Complex Identification in Protein-Protein Interaction Networks
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     Due to the significant role in understanding cellular processes, the decomposition of Protein-Protein Interaction (PPI) networks into essential building blocks, or complexes, has received much attention for functional bioinformatics research in recent years. One of the well-known bi-clustering descriptors for identifying communities and complexes in complex networks, such as PPI networks, is modularity function.   The contribution of this paper is to introduce heuristic optimization models that can collaborate with the modularity function to improve its detection ability. The definitions of the formulated heuristics are based on nodes and different levels of their neighbor properties.  The modularity function and the formulated heuristics are then injected into the mechanism of a single objective Evolutionary Algorithm (EA) tailored specifically to tackle the problem, and thus, to identify possible complexes from PPI networks. In the experiments, different overlapping scores are used to evaluate the detection accuracy in both complex and protein levels. According to the evaluation metrics, the results reveal that the introduced heuristics have the ability to harness the accuracy of the existing modularity while identifying protein complexes in the tested PPI networks.

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Publication Date
Sun Jan 01 2023
Journal Name
Journal Of Robotics And Control (jrc)
Artificial Intelligence Based Deep Bayesian Neural Network (DBNN) Toward Personalized Treatment of Leukemia with Stem Cells
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The dynamic development of computer and software technology in recent years was accompanied by the expansion and widespread implementation of artificial intelligence (AI) based methods in many aspects of human life. A prominent field where rapid progress was observed are high‐throughput methods in biology that generate big amounts of data that need to be processed and analyzed. Therefore, AI methods are more and more applied in the biomedical field, among others for RNA‐protein binding sites prediction, DNA sequence function prediction, protein‐protein interaction prediction, or biomedical image classification. Stem cells are widely used in biomedical research, e.g., leukemia or other disease studies. Our proposed approach of

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Publication Date
Sun Oct 01 2023
Journal Name
Baghdad Science Journal
Impacts of Denial-of-Service Attack on Energy Efficiency Pulse Coupled Oscillator
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The Pulse Coupled Oscillator (PCO) has attracted substantial attention and widely used in wireless sensor networks (WSNs), where it utilizes firefly synchronization to attract mating partners, similar to artificial occurrences that mimic natural phenomena. However, the PCO model might not be applicable for simultaneous transmission and data reception because of energy constraints. Thus, an energy-efficient pulse coupled oscillator (EEPCO) has been proposed, which employs the self-organizing method by combining biologically and non-biologically inspired network systems and has proven to reduce the transmission delay and energy consumption of sensor nodes. However, the EEPCO method has only been experimented in attack-free networks without

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Publication Date
Fri Jan 10 2025
Journal Name
Iraqi Journal Of Science
Intrusion Detection Approach Based on DNA Signature
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Publication Date
Fri Sep 23 2022
Journal Name
Specialusis Ugdymas
Intrusion Detection System Techniques A Review
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With the high usage of computers and networks in the current time, the amount of security threats is increased. The study of intrusion detection systems (IDS) has received much attention throughout the computer science field. The main objective of this study is to examine the existing literature on various approaches for Intrusion Detection. This paper presents an overview of different intrusion detection systems and a detailed analysis of multiple techniques for these systems, including their advantages and disadvantages. These techniques include artificial neural networks, bio-inspired computing, evolutionary techniques, machine learning, and pattern recognition.

Publication Date
Sun Oct 30 2022
Journal Name
Iraqi Journal Of Science
An Internet of Things Botnet Detection Model Using Regression Analysis and Linear Discrimination Analysis
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The Internet of Things (IoT) has become a hot area of research in recent years due to the significant advancements in the semiconductor industry, wireless communication technologies, and the realization of its ability in numerous applications such as smart homes, health care, control systems, and military. Furthermore, IoT devices inefficient security has led to an increase cybersecurity risks such as IoT botnets, which have become a serious threat. To counter this threat there is a need to develop a model for detecting IoT botnets.

This paper's contribution is to formulate the IoT botnet detection problem and introduce multiple linear regression (MLR) for modelling IoT botnet features with discriminating capability and alleviatin

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Publication Date
Fri Dec 08 2023
Journal Name
Iraqi Journal Of Science
Intrusion Detection Approach Based on DNA Signature
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Intrusion-detection systems (IDSs) aim at detecting attacks against computer systems and networks or, in general, against information systems. Most of the diseases in human body are discovered through Deoxyribonucleic Acid (DNA) investigations. In this paper, the DNA sequence is utilized for intrusion detection by proposing an approach to detect attacks in network. The proposed approach is a misuse intrusion detection that consists of three stages. First, a DNA sequence for a network traffic taken from Knowledge Discovery and Data mining (KDD Cup 99) is generated. Then, Teiresias algorithm, which is used to detect sequences in human DNA and assist researchers in decoding the human genome, is used to discover the Shortest Tandem Repeat (S

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Publication Date
Sun Mar 04 2018
Journal Name
Iraqi Journal Of Science
Improving Detection Rate of the Network Intrusion Detection System Based on Wrapper Feature Selection Approach
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Regarding the security of computer systems, the intrusion detection systems (IDSs) are essential components for the detection of attacks at the early stage. They monitor and analyze network traffics, looking for abnormal behaviors or attack signatures to detect intrusions in real time. A major drawback of the IDS is their inability to provide adequate sensitivity and accuracy, coupled with their failure in processing enormous data. The issue of classification time is greatly reduced with the IDS through feature selection. In this paper, a new feature selection algorithm based on Firefly Algorithm (FA) is proposed. In addition, the naïve bayesian classifier is used to discriminate attack behaviour from normal behaviour in the network tra

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Publication Date
Thu Jul 01 2021
Journal Name
Iraqi Journal Of Science
Vehicles Detection System at Different Weather Conditions
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The importance of efficient vehicle detection (VD) is increased with the expansion of road networks and the number of vehicles in the Intelligent Transportation Systems (ITS). This paper proposes a system for detecting vehicles at different weather conditions such as sunny, rainy, cloudy and foggy days. The first step to the proposed system implementation is to determine whether the video’s weather condition is normal or abnormal. The Random Forest (RF) weather condition classification was performed in the video while the features were extracted for the first two frames by using the Gray Level Co-occurrence Matrix (GLCM). In this system, the background subtraction was applied by the mixture of Gaussian 2 (MOG 2) then applying a number

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Publication Date
Thu Apr 28 2022
Journal Name
Iraqi Journal Of Science
Study of Land Cover Changes of Baghdad Using Multi-Temporal Landsat Satellite Images
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The main goal of this work is study the land cover changes for "Baghdad city" over a period of (30) years using multi-temporal Landsat satellite images (TM, ETM+ and OLI) acquired in 1984, 2000, and 2015 respectively. In this work, The principal components analysis transform has been utilized as multi operators, (i.e. enhancement, compressor, and temporal change detector). Since most of the image band's information are presented in the first PCs image. Then, the PC1 image for all three years is partitioned into variable sized blocks using quad tree technique. Several different methods of classification have been used to classify Landsat satellite images; these are, proposed method singular value decomposition (SVD) using Visual Basic sof

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Publication Date
Wed Dec 01 2021
Journal Name
Iraqi Journal Of Science
Interpretation of Potential Fields and Detection of Deep Faults of Kut-Dewania- Fajir Area, Central Iraq
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Gravity and magnetic data are used to study the tectonic situation of Kut- Dewania- Fajir and surrounding areas in central Iraq. The study includes the using of window method with different spacing to separate the residual from regional anomalies of gravity and magnetic data. The Total Horizontal Derivative (THD) techniques used to identify the fault trends in the basement and sedimentary rocks depending upon gravity and magnetic data. The obtained faults trends from gravity data are (N30W), (N60W) (N80E) and (N20E) and from magnetic data are (N30W), (N70E), (N20E),(N10W),(N40E). It is believed that these faults extend from the basement to the lower layers of the sedimentary rocks except the N60W trend that observed clearly in gravity in

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