This study aimed to get a better understanding of molecular epidemiology and genetic variation in the spike glycoprotein as a key viral component involved in viral entrance into host cells and as a potential vaccination target. Three Iraqi SARS-CoV-2 strains were investigated using whole-genome sequencing, with two of them clustering into the 20A (GH) clade, and the remaining strain is clustered in 20E (GV) clade, belonging to the B.1.36.1 and B.1.177.80 lineage, respectively. Whole-genome sequencing of the viral RNA samples revealed nine sporadic nonsynonymous uncommon mutations with frequency ranged from 0.00 to 0.19%. The ORF1ab, ORF1a, ORF3a, S, N, intergenic, ORF7 and ORF8 areas have seen the most changes. Furthermore, in all of our sequences, we discovered a D614G (aspartic acid to glycine) mutation in spike protein that co-occurred with an NSP12 P323L (viral RNA-dependent RNA polymerase) mutation. The findings point to several viral introductions in Iraq and provide new genetic information on SARS-CoV-2 at the worldwide level. Pathogenesis, diagnostics and vaccine development require information such as SNPs and mutations.
In this paper, the probabilistic behavior of plain concrete beams subjected to flexure is studied using a continuous mesoscale model. The model is two-dimensional where aggregate and mortar are treated as separate constituents having their own characteristic properties. The aggregate is represented as ellipses and generated under prescribed grading curves. Ellipses are randomly placed so it requires probabilistic analysis for model using the Monte Carlo simulation with 20 realizations to represent geometry uncertainty. The nonlinear behavior is simulated with an isotropic damage model for the mortar, while the aggregate is assumed to be elastic. The isotropic damage model softening be
In the present work, pattern recognition is carried out by the contrast and relative variance of clouds. The K-mean clustering process is then applied to classify the cloud type; also, texture analysis being adopted to extract the textural features and using them in cloud classification process. The test image used in the classification process is the Meteosat-7 image for the D3 region.The K-mean method is adopted as an unsupervised classification. This method depends on the initial chosen seeds of cluster. Since, the initial seeds are chosen randomly, the user supply a set of means, or cluster centers in the n-dimensional space.The K-mean cluster has been applied on two bands (IR2 band) and (water vapour band).The textural analysis is used
... Show MoreFree Space Optics (FSO) plays a vital role in modern wireless communications due to its advantages over fiber optics and RF techniques where a transmission of huge bandwidth and access to remote places become possible. The specific aim of this research is to analyze the Bit-Error Rate (BER) for FSO communication system when the signal is sent the over medium of turbulence channel, where the fading channel is described by the Gamma-Gamma model. The signal quality is improved by using Optical Space-Time Block- Code (OSTBC) and then the BER will be reduced. Optical 2×2 Alamouti scheme required 14 dB bit energy to noise ratio (Eb/N0) at 10-5 bit error rate (BER) which gives 3.5 dB gain as compared to no diversity scheme. Th
... Show MoreThe present work divided into two parts, first the experimental side which included the
measuring of the first natural frequency for the notched and unnotched cantilever composite beams
which consisted of four symmetrical layers and made of Kevlar- epoxy reinforced. A numerical
study covers the effect of notches on the natural frequencies of the same specimen used in the
experimental part. The mathematical model for the beam contains two open edges on the upper
surface. The effect of the location of cracks relative to the restricted end, depth of cracks, volume
fraction of fibers and orientation of the fiber on the natural frequencies are explored. The results
were calculated using the known engineering program (ANSY
Fourteen isolates were collected from a previous study and all were assigned to be Streptomyces genus, according to physiological and biochemical tests, however all the isolates varied morphologically and exhibited different antimicrobial activity. All 14 isolates were confirmed Streptomyces by 16S rRNA PCR amplification. Six isolates with high antimicrobial activities were ascertained Streptomyces spp. by sequencing and phylogenetic analysis. Two isolates among the selected 6 isolates with antimicrobial activity against E. coli and S. aureus . It recommended to make a complete sequence for 16S rRNA to detect the species that
... Show MoreThis research aims to study the structural analysis of the 2D reflection seismic data for the Judaida subsurface structure located in Kirkuk province, northern Iraq. It is located 60 Km southwest of Kirkuk oil field, and 35 Km southwest of Jambur oil field, the Daquq River passes through the study area. The reflectors in the seismic section were picked and identified by using the synthetic seismograms generated from the logs data of the Jd-1 well. Three main seismic reflectors, Fatha, Jeribe, and the Euphrates were chosen. These mentioned sedimentary formations were deposited during the Middle Miocene, Lower Miocene, and Early-Mid Miocene respectively. Time and depth maps were drawn for these three reflectors by processing average data f
... Show MoreMonthly rainfall data of Baghdad meteorological station were taken to study the time behavior of these data series. Significant fluctuation,very slight increasing trend and significant seasonality were noticed. Several ARIMA models were tested and the best one were checked for the adequacy. It is found that the SEASONAL ARIMA model of the orders SARIMA(2,1,3)x(0,1,1) is the best model where the residual of this model exhibits white noise property, uncorrelateness and they are normally distributed. According to this model, rainfall forecast for four years was also achieved and showing similar trend and extent of the original data.
The research objective are analyze financial leverage advantage through analyze and discuss financial leverage cost, and achieve tax advantage. study include two firms ,oil firm and industrial companies firm with limited liability.The inductive method is used for the applied part in analyzing the financial data of the companies considered in 2011-2015.The result of the study shows that the financial leverage achieve present value of the costs is Negative . The study concluded that the most important conclusions of the tax advantage of leverage is higher costs as well as achieving a low tax shield ,This study found out the results that interest payments related to pre-tax all of the loan amount and the percentage of the interest rate on b
... Show MoreCharacteristic evolving is most serious move that deal with image discrimination. It makes the content of images as ideal as possible. Gaussian blur filter used to eliminate noise and add purity to images. Principal component analysis algorithm is a straightforward and active method to evolve feature vector and to minimize the dimensionality of data set, this paper proposed using the Gaussian blur filter to eliminate noise of images and improve the PCA for feature extraction. The traditional PCA result as total average of recall and precision are (93% ,97%) and for the improved PCA average recall and precision are (98% ,100%), this show that the improved PCA is more effective in recall and precision.