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Genetic variation between wild type and auxotrophic mutant isolates of Sinorhizobium meliloti by using RAPDPCR technique

SGI2 wild type isolate of Sinorhizobium meliloti was isolated from Medicago sativa (alfalfa) plant which was obtained from Al-Tarmiaa region / Baghdad. Nine auxotrophic mutants were obtained from the SGI2 wild type isolate by mutagenesis with Nitrous acid (HNO2). The SGI2 wild type and the all auxotrophic mutant isolates had two Megaplasmids; pSymA and pSymB. No genetic variations in plasmid number and size were detected when gel electrophoresis was done for plasmid profile detection. Genetic variations by using RAPD-PCR technique were obtained between wild type and auxotrophic mutant isolates. One band was detected in SGI6 gel profile with 1.5 Kb size when OPY-04 primer was used. Using OPB7 primer by using RAPD-PCR technique showed large variation between all the isolates. Two bands were obtained from the SGI2 wild type isolate with 800 bases and 1.5 Kb in size. These bands were absent from the auxotrophic mutant isolates. The band with 800 bases was also found in SGI10 isolate. The other auxotrophic mutant isolates have different bands with size ranging from 200 bases and more than 1.5 Kb for the SGI6 isolate. No bands were detected in SGI8, SGI9 and SG12 isolates. The large differences in bands number and size suggested that the variation is clear at the genes level of the total genome and not at plasmid level as a result after nitrous acid mutagenesis. 

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Publication Date
Sun May 30 2021
Journal Name
Iraqi Journal Of Science
Isolation,Characterization and Optimization of Wild Type Sinorhizobium meliloti to Produce High Concentrations of Indole Acetic Acid

Rhizobium bacteria was isolated from the root nodules of Medicago sativa plants and, based on morphological and some biochemical properties, it was characterized as Sinorhizobium meliloti. We studied the ability of this isolate, as well as that of Agrobacterium rhizogenes R1601, to produce the auxin  indole acetic acid (IAA). For purposes of control, both isolates, in the absence of tryptophan-L, were similarly tested. The identification of IAA was achieved by checking the colour reactions with Salkowski’s reagent. Low amounts (23, 69 and 26,77 µɡ/ml) of IAA were produced by S.meliloti and A.rhizogenes after 24 and 72 hours of incubation, respectively. S.meliloti was

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Publication Date
Mon Mar 08 2021
Journal Name
Baghdad Science Journal
some Chemical effects on growth of azotobacter chroococcum wild-type and it's mutant-44

the effecth of some chemicals on growth of two azotobacter chroococcum and aniline caused significant increase of growth

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Publication Date
Wed Mar 15 2017
Journal Name
Ibn Al-haitham Journal For Pure And Applied Sciences
Biodiversity and Genetic Relationships to the Species for the genus Gladiolus L. (Iridaceae) Wild Growing in Iraq Using RAPD-PCR Technique

This study observed the genetic diversity and relationships among 4 species belonging to genus Gladiolus L. , by using the Random  Amplified Polymorphic DNA (RAPD) technique , the study  includes extraction of genomic DNA from the dray leaves by using commercial kit . 4 random primers  used the produced of many polymorphic bands among the 4 species , it was also possible to fined the DNA fingerprint of all studied species.Through the appearance of a number of bands that were unique to each species.Genetic distances ranged from 0.10 to 0.86, and used cluster  analysis were performed to construct dendrogram.Cluster analysis grouped the 4 species Into tow main clusters depending on their ancestor and their morphological

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Publication Date
Mon Apr 10 2017
Journal Name
Ibn Al-haitham Journal For Pure And Applied Sciences
Genetic Diversity of Iraqi of Common Reed Phragmites australis by Using RAPD Technique

   Genetic diversity was studied in 31 Iraqi common reed samples , which were collected from Iraqi marshes in Basrah , Messan and Thi-Qar provinces and also from different areas in Baghdad province . Random amplified polymorphic DNA (RAPD) technique was used for evaluation of genetic diversity between collected samples . Seven primers were used for polymorphism detecting between common reed samples . The results revealed 102 bands for the all samples when RAPD-PCR was used . The percentage rate for the monomorphic bands is 6.86% , while the percentage rate for the polymorphic bands is 93.13% , and the numbers of these bands are ranging between 10 to 17 for each used primer .  The UBC1 primer gave the highest number of poly

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Publication Date
Sun Oct 22 2023
Journal Name
Iraqi Journal Of Science
Genetic Diversity Among Some Aspergillus flavus Isolates by Using Inter simple sequence repeats (ISSR)

Aspergillus flavus isolates which are considered on conidial shape through microscopic examination and mycelial colour through cultural properties . Primary screening for the ability of A. flavus isolates for aflatoxin production was determined using A.flavus parasiticus agar medium (AFPA) as well , 7 isolates from 11 isolates give a positive result by the presence of bright yellow-orange pigments indicated the presence of aflatoxins. Molecular genetics techniques using DNA polymorphism have been increasingly used to characterize and identify genetic diversity and relationships among eleven A. flavus isolated from different source using the ISSR(inter simple sequence repeats) technique. Three universal primers designed at University of B

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Publication Date
Sun Jul 29 2018
Journal Name
Iraqi Journal Of Science
Steganography Technique using Genetic Algorithm

Steganography is a useful technique that helps in securing data in communication using different data carriers like audio, video, image and text. The most popular type of steganography is image steganography. It mostly uses least significant bit (LSB) technique to hide the data but the probability of detecting the hidden data using this technique is high. RGB is a color model which uses LSB to hide the data in three color channels, where each pixel is represented by three bytes to indicate the intensity of red, green and blue in that pixel. In this paper, steganography based RGB image is proposed which depends on genetic algorithm (GA). GA is used to generate random key that represents the best ordering of secret (image/text) blocks to b

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Publication Date
Tue Feb 28 2023
Journal Name
Iraqi Journal Of Science
Genetic Diversity of Trichoderma and Hypocrea lixii Iraqi Strains by Using Random Amplified Polymorphic DNA (RAPD) Technique

       As the diversity and characteristics of Trichoderma species are difficult to determine using morphological methods, henceforth molecular tools are crucial. This study utilized random amplified polymorphic DNA (RAPD) technique to investigate the genetic diversity of Trichoderma with sexual phase Hypocrea and to identify similarities and differences in the phylogenetic tree. Nine Iraqi Trichoderma strains (four strains of T. atroviride, one strain of Hypocrea lixii, two strains of T. gamsii and two strains of T. longibriantium) were examined in this research. The genomic DNA of each species was extracted and amplified with each of the fiv

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Publication Date
Tue Mar 14 2023
Journal Name
Iraqi Journal Of Science
Improve PGP Cryptography Protocol Using Genetic NTRU Technique

The strong cryptography employed by PGP (Pretty Good Privacy) is one of the best available today. The PGP protocol is a hybrid cryptosystem that combines some of the best features of both conventional and public-key cryptography. This paper aim to improve PGP protocol by combined between the Random Genetic algorithm, NTRU (N-th degree Truncated polynomial Ring Unit) algorithm with PGP protocol stages in order to increase PGP protocol speed, security, and make it more difficult in front of the counterfeiter. This can be achieved by use the Genetic algorithm that only generates the keys according to the Random Genetic equations. The final keys that obtained from Genetic algorithm were observed to be purely random (according to the randomne

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Publication Date
Fri Jun 01 2018
Journal Name
Journal Of Engineering
Compensation of the Nonlinear Power Amplifier by Using SCPWL Predistorter with Genetic Algorithm in OFDM technique

The High Power Amplifiers (HPAs), which are used in wireless communication, are distinctly characterized by nonlinear properties. The linearity of the HPA can be accomplished by retreating an HPA to put it in a linear region on account of power performance loss. Meanwhile the Orthogonal Frequency Division Multiplex signal is very rough. Therefore, it will be required a large undo to the linear action area that leads to a vital loss in power efficiency. Thereby, back-off is not a positive solution. A Simplicial Canonical Piecewise-Linear (SCPWL) model based digital predistorters are widely employed to compensating the nonlinear distortion that introduced by a HPA component in OFDM technology. In this paper, the genetic al

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Publication Date
Wed Apr 10 2019
Journal Name
Engineering, Technology & Applied Science Research
Content Based Image Clustering Technique Using Statistical Features and Genetic Algorithm

Text based-image clustering (TBIC) is an insufficient approach for clustering related web images. It is a challenging task to abstract the visual features of images with the support of textual information in a database. In content-based image clustering (CBIC), image data are clustered on the foundation of specific features like texture, colors, boundaries, shapes. In this paper, an effective CBIC) technique is presented, which uses texture and statistical features of the images. The statistical features or moments of colors (mean, skewness, standard deviation, kurtosis, and variance) are extracted from the images. These features are collected in a one dimension array, and then genetic algorithm (GA) is applied for image clustering.

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