Preferred Language
Articles
/
ijs-11938
Sequence Variation and Phylogenetic Relationships Among Ten Iraqi Rice Varieties Using RM171 Marker
...Show More Authors

In the present study rice microsatellite marker (RM 171) was used to evaluate the genetic diversity and determining cultivar identity among ten rice varieties (oryza sativa L.) (Seven local and three commercial varieties). PCR technique was performed using two specific primers. The result showed presence of a band (305bp) DNA sequencing was done to PCR product to detect sequence variation between the ten rice varieties. In order to detect the relationship among all varieties, alignment of RM171 marker sequence was carried out for each variety. Amber and Daawat varieties showed the highest similarity with 98% identity, while the difference (2%) consists of two gaps and two transition mutations (T/C) and (C/T). Furthermore, Amber was aligned with mashkhab-1; 6% variation was noticed includes 5% gaps of 16 nucleotides which are not found in Amber that distributed in four different locations. In addition to the gaps, two transversion mutations were identified (G/C) and (G/T). Phylogenetic relationships among varieties were achieved, which showed that genetic distances were ranged from 0.029 to 1.999 among rice varieties. Cluster analyses grouped the ten varieties into five main clusters depending on their geographic origin, their ancestor and their aroma characteristics and this revealed relatedness between aromatic and non -aromatic with few of independent varieties. The result of this study could be helpful in the future for rice breeding programs

View Publication Preview PDF
Quick Preview PDF
Publication Date
Sun Apr 30 2023
Journal Name
Sabrao Journal Of Breeding And Genetics
PATH COEFFICIENT ANALYSES OF INTRODUCED RICE VARIETIES UNDER DIFFERENT PLANTING DISTANCES
...Show More Authors

Five rice (Oryza sativa L.) cultivars (N22, Amber, Moroberekan, Kinandang Patong, and Azucena) underwent path coefficient analysis across three plant spacings (15 cm × 15 cm, 20 cm × 20 cm, and 25 cm× 25 cm) in the summer of 2017 at the College of Agricultural Engineering Sciences, University of Baghdad, Al-Jadriya, Iraq. The experiment proceeded in a randomized complete block design (RCBD) with a split-plot arrangement and three replications. The main plots included three planting distances, and the subplot comprised five varieties. The traits studied were plant height, flag leaf area, number of tillers, panicle number, length and branches, grains per panicle, 1000-grain weight, and the percentage of unfilled grains. The results

... Show More
View Publication
Scopus (3)
Crossref (1)
Scopus Clarivate Crossref
Publication Date
Mon Dec 23 2024
Journal Name
Journal Of Baghdad College Of Dentistry
The Dental Caries and Some Salivary Constituents among a Group of Ten Years Iraqi Passive Smokers
...Show More Authors

Background: Passive smoking and dental caries affect the integrity of the health of individuals and both of them affected by sociodemographic characteristics of those individuals. This research aimed to investigate the severity of dental caries in relation to salivary magnesium and zinc of stimulated whole saliva of a group of 10 years passive smokers in comparison with normal subjects. Materials and methods: the study group included 40 subjects (20boys and 20 girls), with an age of 10 years of passive smokers determined by a questionnaire. The control group included 40 normal subjects of the same gender and age of the study group. The diagnosis and recording of dental caries was measured by (D1-4MFS & d1-4mfs) index according to the criter

... Show More
View Publication Preview PDF
Crossref
Publication Date
Wed Jan 05 2022
Journal Name
Journal Of The Faculty Of Medicine Baghdad
Possible relationships of selected food items to osteoporosis among a group of Iraqi women
...Show More Authors

Background: Osteoporosis is a global health problem which is estimated to affect more than 200 million people worldwide, especially postmenopausal women. It is characterized by decreased bone mineral density leading to fragility and increased risk of fractures.

 Objective: This study was conducted to explore the consumption of inappropriate foods related to osteoporosis among a group of Iraqi women.

Patients and methods: A cross sectional study of 140 females aged ≥ 40 years attending polyclinics in Al-Dora sector in Baghdad city from 18th January to 24th April 2021. The bone mineral density was measured by portable quantitative ca

... Show More
View Publication Preview PDF
Crossref (1)
Crossref
Publication Date
Sun Dec 29 2019
Journal Name
Iraqi Journal Of Science
Phylogenetic tree analysis based on the 16S sequence alignment for Klebsiella spp. isolated from different sources
...Show More Authors

16S ribosomal RNA (16S rRNA) gene sequences used to study bacterial phylogeny and taxonomy have been by far the most common housekeeping genetic marker utilized for identification and ancestor determination. This study aimed to investigate, for the first time, the relationship between Klebsiella spp. isolated from clinical and environmental samples in Iraq.

Fifty Klebsiella spp. isolates were isolated from clinical and environmental sources. Twenty-five isolates were collected from a fresh vegetable (Apium graveolens) and 25 from clinical samples (sputum, wound swab, urine). Enteric bacteria were isolated on selective and differential media and identified by an automatic identification system, vitek-2.

... Show More
View Publication Preview PDF
Scopus (4)
Crossref (1)
Scopus Crossref
Publication Date
Sun Sep 29 2019
Journal Name
Iraqi Journal Of Science
Phylogenetic tree analysis based on the 16S sequence alignment for Klebsiella spp. isolated from different sources
...Show More Authors

16S ribosomal RNA (16S rRNA) gene sequences used to study bacterial phylogeny and taxonomy have been by far the most common housekeeping genetic marker utilized for identification and ancestor determination. This study aimed to investigate, for the first time, the relationship between Klebsiella spp. isolated from clinical and environmental samples in Iraq.

     Fifty Klebsiella spp. isolates were isolated from clinical and environmental sources. Twenty-five isolates were collected from a fresh vegetable (Apium graveolens) and 25 from clinical samples (sputum, wound swab, urine). Enteric bacteria were isolated on selective and differential media and identified by an automatic identif

... Show More
View Publication Preview PDF
Scopus (2)
Crossref (2)
Scopus Crossref
Publication Date
Tue Jan 01 2019
Journal Name
Plant Archives J.
Effect of planting distance on yield and yield components of four introduced upland rice varieties underaerobic conditions
...Show More Authors

Scopus (4)
Scopus
Publication Date
Wed Jan 12 2022
Journal Name
Iraqi Journal Of Science
Classification of Iraqi Anber Rice by Using Image Processing and KNN Algorithm
...Show More Authors

Image classification takes a large area in computer vision in term of quality or type or data sharing and so on Iraqi Anber Rice in they need this kind of work, where few in the field of computer science that deal with the types of Iraqi Anber rice, and because of the Anber Rice are grown and produced in Iraq only, and because of the importance of rice around the world and especially in Iraq. In this paper a proposed system distinguishes between the classes of Iraqi Anber Rice that Grown in different parts of Iraq, and have their own specifications for each class by using moment invariant and KNN algorithm. Iraqi Anber Rice that is more than Fiftieth class Cultivated and irrigated in different parts of Iraq, and because of the different

... Show More
View Publication Preview PDF
Publication Date
Fri Dec 01 2023
Journal Name
Iop Conference Series: Earth And Environmental Science
Phylogenetic Relationship of Iraqi Vespa orientalis Linnaeus 1771 Wasps Using Mitochondrial CO1
...Show More Authors
Abstract<p>Oriental wasps are scavengers, and they have also represented an enormous issue for beekeepers, they destroy beehives and reduce the flight of bees. In addition, the sting of hornets may cause medical problems, which differ according to the response of the individuals, including severe sensitivity, swelling, and slight pain. This study provides the first molecular phylogeny of the oriental wasp <italic>Vespa orientalis</italic> L. in Iraq. Mitochondrial DNAs of the 547bp fragment cytochrome oxidase subunit 1 (CO1) area were sequenced and analyzed from 10 wasp specimens collected in the north, middle, and south of Iraq. The CO1 gene found in the Iraqi isolates was used to cre</p> ... Show More
View Publication
Scopus Crossref
Publication Date
Sun Oct 22 2023
Journal Name
Iraqi Journal Of Science
Genetic Diversity Among Some Aspergillus flavus Isolates by Using Inter simple sequence repeats (ISSR)
...Show More Authors

Aspergillus flavus isolates which are considered on conidial shape through microscopic examination and mycelial colour through cultural properties . Primary screening for the ability of A. flavus isolates for aflatoxin production was determined using A.flavus parasiticus agar medium (AFPA) as well , 7 isolates from 11 isolates give a positive result by the presence of bright yellow-orange pigments indicated the presence of aflatoxins. Molecular genetics techniques using DNA polymorphism have been increasingly used to characterize and identify genetic diversity and relationships among eleven A. flavus isolated from different source using the ISSR(inter simple sequence repeats) technique. Three universal primers designed at University of B

... Show More
View Publication Preview PDF
Publication Date
Sat Mar 01 2014
Journal Name
Glob. J. Mol. Evol. Genom
Genetic diversity and relationships among Verbascum species in Iraq by RAPD-PCR technique
...Show More Authors